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Installation of OrthoMCL Pipeline

For the database setup step , you can previously create the database by logging into the MySQL server as root and running:

mysql> CREATE DATABASE orthomcl;
mysql> CREATE USER orthomcl@'localhost';
mysql> set password for orthomcl@localhost = password('yourpassword');
mysql> GRANT SELECT,INSERT,UPDATE,DELETE,CREATE VIEW,CREATE, INDEX, DROP on orthomcl.* TO orthomcl@localhost;

It is important that you create a NEW DATABASE called orthomcl.